Sachin Pundhir

Sachin Pundhir

Senior Researcher

ORCID: 0000-0001-9047-7280

Publication year:
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1 - 10 out of 24Page size: 10
  1. 2008

  2. PredictBias: a server for the identification of genomic and pathogenicity islands in prokaryotes

    Pundhir, Sachin & Kumar, A., 2008, In: In Silico Biology. 8, 3-4, p. 223-234 12 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  3. 2011

  4. SSPred: a prediction server based on SVM for the identification and classification of protein involved in bacterial secretion systems.

    Pundhir, Sachin & Kumar, A., 2011, In: Bioinformation. 6, 10, p. 380-382 3 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  5. 2012
  6. Published

    DeepBlockAlign: a tool for aligning RNA-seq profiles of read block patterns

    Langenberger, D., Pundhir, Sachin, Ekstrøm, Claus Thorn, Stadler, P. F., Hoffmann, S. & Gorodkin, Jan, 2012, In: Bioinformatics. 28, 1, p. 17-24 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  7. 2014
  8. Published

    Structured RNAs and synteny regions in the pig genome

    Anthon, Christian, Tafer, H., Havgaard, Jakob Hull, Thomsen, B., Hedegaard, J., Seemann, Ernst Stefan, Pundhir, Sachin, Kehr, S., Bartschat, S., Nielsen, M., Nielsen, R. O., Fredholm, Merete, Stadler, P. F. & Gorodkin, Jan, 2014, In: BMC Genomics. 15, 27 p., 459.

    Research output: Contribution to journal › Journal article › Research › peer-review

  9. Published

    Spatially conserved regulatory elements identified within human and mouse Cd247 gene using high-throughput sequencing data from the ENCODE project.

    Pundhir, Sachin, Hannibal, T. D., Bang-Berthelsen, C. H., Wegener, A. K., Pociot, Flemming, Holmberg, D. I. & Gorodkin, Jan, 2 May 2014, In: Gene. 545, 1, p. 80-87 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  10. 2015
  11. Published

    Emerging applications of read profiles towards the functional annotation of the genome

    Pundhir, Sachin, Poirazi, P. & Gorodkin, Jan, 19 May 2015, In: Frontiers in Genetics. 6, 11 p., 188.

    Research output: Contribution to journal › Journal article › Research › peer-review

  12. Published

    Differential and coherent processing patterns from small RNAs

    Pundhir, Sachin & Gorodkin, Jan, 13 Jul 2015, In: Scientific Reports. 5, 16 p., 12062.

    Research output: Contribution to journal › Journal article › Research › peer-review

  13. 2016
  14. Published

    Peak-valley-peak pattern of histone modifications delineates active regulatory elements and their directionality

    Pundhir, Sachin, Bagger, F. O., Lauridsen, F. K. B., Rapin, N. P. J. & Porse, Bo Torben, 2016, In: Nucleic Acids Research. 44, 9, p. 4037-4051 15 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  15. Published

    BloodSpot: a database of gene expression profiles and transcriptional programs for healthy and malignant haematopoiesis

    Bagger, F. O., Sasivarevic, D., Hadi Sohi, S., Laursen, L. G., Pundhir, Sachin, Sønderby, C. K., Winther, Ole, Rapin, N. & Porse, Bo Torben, 4 Jan 2016, In: Nucleic Acids Research. 44, D1, p. D917-24 8 p.

    Research output: Contribution to journal › Journal article › Research › peer-review

  16. Published

    Adipocyte gene expression and DNA methylation patterns differ significantly between lean and obese pigs

    Jacobsen, M. J., Havgaard, Jakob Hull, Mentzel, Caroline M. Junker, Sørensen, P. M., Pundhir, Sachin, Anthon, Christian, Karlskov-Mortensen, Peter, Bruun, Camilla Vibeke Sichlau, Cirera, Susanna, Gorodkin, Jan, Jørgensen, Claus Bøttcher, Barrès, Romain & Fredholm, Merete, 9 Nov 2016, In: Journal of Animal Science. 94, Supplement 4, p. 46-47 2 p., P2019.

    Research output: Contribution to journal › Conference abstract in journal › Research › peer-review

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