Joachim Lütken Weischenfeldt
Group leader, Clinical Professor
Weischenfeldt Group
Københavns Universitet, BRIC, Ole Maaløes Vej 5
2200 København N
Member of:
- Published
A Novel Gene Signature-Based Model Predicts Biochemical Recurrence-Free Survival in Prostate Cancer Patients after Radical Prostatectomy
Shi, R., Bao, X., Weischenfeldt, Joachim Lütken, Schaefer, C., Rogowski, P., Schmidt-Hegemann, N., Unger, K., Lauber, K., Wang, X., Buchner, A., Stief, C., Schlomm, T., Belka, C. & Li, M., 2020, In: Cancers. 12, 1, p. 1-12 12 p.Research output: Contribution to journal › Journal article › Research › peer-review
A cell-based model system links chromothripsis with hyperploidy
Mardin, B. R., Drainas, A. P., Waszak, S. M., Weischenfeldt, Joachim Lütken, Isokane, M., Stütz, A. M., Raeder, B., Efthymiopoulos, T., Buccitelli, C., Segura-Wang, M., Northcott, P., Pfister, S. M., Lichter, P., Ellenberg, J. & Korbel, J. O., 2015, In: Molecular Systems Biology. 11, 9, p. 828Research output: Contribution to journal › Journal article › Research › peer-review
- Published
A polygenic two-hit hypothesis for prostate cancer
Houlahan, K. E., Livingstone, J., Fox, N. S., Kurganovs, N., Zhu, H., Sietsma Penington, J., Jung, C-H., Yamaguchi, T. N., Heisler, L. E., Jovelin, R., Costello, A. J., Pope, B. J., Kishan, A. U., Corcoran, N. M., Bristow, R. G., Waszak, S. M., Weischenfeldt, J., He, H. H., Hung, R. J., Hovens, C. M. & 1 others, , 2023, In: Journal of the National Cancer Institute. 115, 4, p. 468-472 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
Rheinbay, E., Nielsen, M. M., Abascal, F., Wala, J. A., Shapira, O., Tiao, G., Hornshøj, H., Hess, J. M., Juul, R. I., Lin, Z., Feuerbach, L., Sabarinathan, R., Madsen, T., Kim, J., Mularoni, L., Shuai, S., Lanzós, A., Herrmann, C., Maruvka, Y. E., Shen, C. & 31 others, , Feb 2020, In: Nature. 578, 7793, p. 102-111 10 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Bone Marrow-derived Macrophages (BMMs): Isolation and applications.
Weischenfeldt, Joachim Lütken & Porse, Bo Torben, 2008, In: Cold Spring Harbor Protocols.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Butler enables rapid cloud-based analysis of thousands of human genomes
Weischenfeldt, Joachim Lütken, PCAWG Technical Working Group, P. T. W. G. & PCAWG Consortium, P. C., 2020, In: Nature Biotechnology. 38, 3, p. 288-292 5 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Accepted/In press
CEA (CEACAM5) expression is common in muscle-invasive urothelial carcinoma of the bladder but unrelated to the disease course
Plage, H., Furlano, K., Neymeyer, J., Weinberger, S., Gerdes, B., Hubatsch, M., Ralla, B., Franz, A., Fendler, A., de Martino, M., Roßner, F., Schallenberg, S., Elezkurtaj, S., Kluth, M., Lennartz, M., Blessin, N. C., Marx, A. H., Samtleben, H., Fisch, M., Rink, M. & 14 others, , 2024, (Accepted/In press) In: BJUI Compass.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis
Carlevaro-Fita, J., Lanzós, A., Feuerbach, L., Hong, C., Mas-Ponte, D., Pedersen, J. S., Johnson, R., Sidiropoulos, N., Weischenfeldt, Joachim Lütken & Brunak, Søren, 2020, In: Communications Biology. 3, 1, p. 1-16 56.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Clinical impact of clonal hematopoiesis in patients with lymphoma undergoing ASCT: a national population-based cohort study
Husby, S., Favero, F., Nielsen, C., Sørensen, B. S., Bæch, J., Grell, K., Hansen, J. W., Rodriguez-Gonzalez, F. G., Haastrup, E. K., Fischer-Nielsen, A., Andersen, P., Arboe, B., Sækmose, S. G., Hansen, P. B., Christiansen, I., Clasen-Linde, E., Meldgaard, L., Ebbesen, L. H., Segel, E. K., Josefsson, P. & 6 others, , 2020, In: Leukemia. 34, p. 3256-3268 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Clonal Hematopoiesis and Epigenetic Age Acceleration in Elderly Danish Twins
Sørensen, M., Tulstrup, Morten Rytter, Hansen, Jakob Werner, Weischenfeldt, Joachim Lütken, Grønbæk, Kirsten & Christensen, K., 2022, In: HemaSphere. 6, 9, 6 p., 768.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Clonal hematopoiesis evolves from pretreatment clones and stabilizes after end of chemotherapy in patients with MCL
Eskelund, C. W., Husby, Simon, Favero, Francesco, Klausen, T. W., Rodriguez Gonzalez, Francisco G, Kolstad, A., Pedersen, L. B., Räty, R. K., Geisler, C. H., Jerkeman, M., Weischenfeldt, Joachim Lütken & Grønbæk, Kirsten, 2020, In: Blood. 135, 22, p. 2000-2004Research output: Contribution to journal › Comment/debate › Research › peer-review
- Published
Clonal hematopoiesis in elderly twins: concordance, discordance, and mortality
Hansen, Jakob Werner, Pedersen, D. A., Larsen, L. A., Husby, Simon, Clemmensen, S. B., Hjelmborg, J., Favero, Francesco, Weischenfeldt, Joachim Lütken, Christensen, K. & Grønbæk, Kirsten, 2020, In: Blood. 135, 4, p. 261-268Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Clonal hematopoiesis is associated with hematological toxicity during lenalidomide-based therapy for MCL
Husby, Simon, Bæch-Laursen, C., Eskelund, C. W., Favero, Francesco, Jespersen, Jakob Schmidt, Hutchings, M., Pedersen, L. B., Niemann, Carsten, Weischenfeldt, Joachim Lütken, Räty, R., Larsen, T. S., Kolstad, A., Jerkeman, M. & Grønbæk, Kirsten, 2022, In: Leukemia. 36, p. 2912-2916Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Combined burden and functional impact tests for cancer driver discovery using DriverPower
Shuai, S., Abascal, F., Amin, S. B., Bader, G. D., Bandopadhayay, P., Barenboim, J., Beroukhim, R., Bertl, J., Boroevich, K. A., Brunak, S., Campbell, P. J., Carlevaro-Fita, J., Chakravarty, D., Chan, C. W. Y., Chen, K., Choi, J. K., Deu-Pons, J., Dhingra, P., Diamanti, K., Feuerbach, L. & 32 others, , 2020, In: Nature Communications. 11, 1, 12 p., 734.Research output: Contribution to journal › Journal article › Research › peer-review
Comparative analysis of different vaccine constructs expressing defined antigens from Mycobacterium tuberculosis.
Doherty, T. M., Olsen, A. W., Weischenfeldt, Joachim Lütken, Huygen, K., D'Souza, S., Kondratieva, T. K., Yeremeev, V. V., Apt, A. S., Raupach, B., Grode, L., Kaufmann, S. & Andersen, P., 2004, In: Journal of Infectious Diseases. 190, 12, p. 2146-53 7 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing
Cortés-Ciriano, I., Lee, J. J. K., Xi, R., Jain, D., Jung, Y. L., Yang, L., Gordenin, D., Klimczak, L. J., Zhang, C. Z., Pellman, D. S., Akdemir, K. C., Alvarez, E. G., Baez-Ortega, A., Beroukhim, R., Boutros, P. C., Bowtell, D. D. L., Brors, B., Burns, K. H., Campbell, P. J., Chan, K. & 32 others, , 6 Feb 2020, In: Nature Genetics.Research output: Contribution to journal › Journal article › Research › peer-review
Deletion lengthening at chromosomes 6q and 16q targets multiple tumor suppressor genes and is associated with an increasingly poor prognosis in prostate cancer
Kluth, M., Jung, S., Habib, O., Eshagzaiy, M., Heinl, A., Amschler, N., Masser, S., Mader, M., Runte, F., Barow, P., Frogh, S., Omari, J., Möller-Koop, C., Hube-Magg, C., Weischenfeldt, J., Korbel, J., Steurer, S., Krech, T., Huland, H., Graefen, M. & 4 others, , 12 Dec 2017, In: OncoTarget. 8, 65, p. 108923-108935 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Disruption of chromatin folding domains by somatic genomic rearrangements in human cancer
Akdemir, K. C., Le, V. T., Chandran, S., Li, Y., Verhaak, R. G., Beroukhim, R., Campbell, P. J., Chin, L., Dixon, J. R., Futreal, P. A., Akdemir, K. C., Alvarez, E. G., Baez-Ortega, A., Beroukhim, R., Boutros, P. C., Bowtell, D. D. L., Brors, B., Burns, K. H., Campbell, P. J., Chan, K. & 32 others, , 2020, In: Nature Genetics. p. 294-305Research output: Contribution to journal › Journal article › Research › peer-review
Dissecting the genomic complexity underlying medulloblastoma
Jones, D. T. W., Jäger, N., Kool, M., Zichner, T., Hutter, B., Sultan, M., Cho, Y-J., Pugh, T. J., Hovestadt, V., Stütz, A. M., Rausch, T., Warnatz, H-J., Ryzhova, M., Bender, S., Sturm, D., Pleier, S., Cin, H., Pfaff, E., Sieber, L., Wittmann, A. & 70 others, , 2 Aug 2012, In: Nature. 488, 7409, p. 100-5 6 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Epithelial specific splicing regulator proteins as emerging oncogenes in aggressive prostate cancer
Advani, R., Luzzi, S., Scott, E., Dalgliesh, C., Weischenfeldt, Joachim Lütken, Munkley, J. & Elliott, D. J., 2023, In: Oncogene. 42, p. 3161-3168 8 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Frequency and Functional Characterization of RUNX1 Germline Variants in Myeloid Neoplasms
Nitschke, N. J., Almosailleakh, M., Niu, Yiyuan, Hansen, Jakob Werner, Raaschou-Jensen, K., Jespersen, Jakob Schmidt, Severinsen, M. T., Roug, A. S., Frödin, Morten, Weischenfeldt, Joachim Lütken, Andersen, M. K. & Grønbæk, Kirsten, 2023, In: Human Mutation. 2023, 11 p., 4738660.Research output: Contribution to journal › Journal article › Research › peer-review
Genome sequencing of pediatric medulloblastoma links catastrophic DNA rearrangements with TP53 mutations
Rausch, T., Jones, D. T. W., Zapatka, M., Stütz, A. M., Zichner, T., Weischenfeldt, J., Jäger, N., Remke, M., Shih, D., Northcott, P. A., Pfaff, E., Tica, J., Wang, Q., Massimi, L., Witt, H., Bender, S., Pleier, S., Cin, H., Hawkins, C., Beck, C. & 31 others, , 20 Jan 2012, In: Cell. 148, 1-2, p. 59-71 13 p.Research output: Contribution to journal › Journal article › Research › peer-review
- Published
Genomes of early onset prostate cancer
Weischenfeldt, Joachim Lütken & Korbel, J. O., 1 Sep 2017, In: Current Opinion in Urology. 27, 5, p. 481-487 7 p.Research output: Contribution to journal › Review › Research › peer-review
- Published
Genomic footprints of activated telomere maintenance mechanisms in cancer
Sieverling, L., Hong, C., Koser, S. D., Ginsbach, P., Kleinheinz, K., Hutter, B., Braun, D. M., Cortés-Ciriano, I., Xi, R., Kabbe, R., Park, P. J., Eils, R., Schlesner, M., Akdemir, K. C., Alvarez, E. G., Baez-Ortega, A., Beroukhim, R., Boutros, P. C., Bowtell, D. D. L., Brors, B. & 32 others, , 2020, In: Nature Communications. 11, 1, 733.Research output: Contribution to journal › Journal article › Research › peer-review
Heterogeneity of ERG expression in prostate cancer: a large section mapping study of entire prostatectomy specimens from 125 patients
Tsourlakis, M., Stender, A., Quaas, A., Kluth, M., Wittmer, C., Haese, A., Graefen, M., Steurer, S., Simon, R., Korbel, J., Weischenfeldt, Joachim Lütken, Huland, H., Sauter, G., Schlomm, T. & Minner, S., 17 Aug 2016, In: B M C Cancer. 16, p. 641Research output: Contribution to journal › Journal article › Research › peer-review
ID: 3997200
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Mammalian tissues defective in nonsense-mediated mRNA decay display highly aberrant splicing patterns
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The landscape of genomic alterations across childhood cancers
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The whole-genome landscape of medulloblastoma subtypes
Research output: Contribution to journal › Journal article › Research › peer-review
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